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Tissue and cell microarray compound for freshly frozen samples

Problem or Unmet Need
Tissue microarrays are an emerging technology for the rapid molecular characterization of biopsy and cell culture samples. Arrays are formed by arranging many tissue samples in a block, then slicing them with a microtome; the multi-tissue sheaf may then be immobilized on a glass slide for analysis. Initial arrays could only be used with a limited set of techniques due to the use of fixed, paraffin-embedded tissue. In contrast, frozen tissue is amenable many more assays, including immunohistochemical staining, nucleic acid quantification, and receptor-ligand binding studies. Recently developed arraying techniques embed frozen tissues in a block of Optimal Cutting Temperature compound (OCT). The low temperature needed to keep OCT in solid form complicates microarray fabrication; brittle blocks cracking or repeated freeze-thaw cycles can degrade frozen sections. Furthermore, cell samples placed into the holes of pre-frozen OCT blocks freeze rapidly, causing cell damage. A simple, reliable and cost-efficient method for making frozen cell and tissue microarrays is needed to realize the technology’s potential.
Details of the Invention
This invention introduces a new compound of OCT and preserving, non-caustic agents for making housing blocks for frozen tissue and cell microarrays. The resultant compound has the same physical characteristics as OCT at low temperatures (below 0°C), but is able to be flexible and soft in solid phase at temperatures above 0°C. Using the new compound simplifies construction, improves sample preservation and enables novel design of tissue array cryo-blocks for pathology and cell biology research.

Suggested Uses:

• A novel compound for fabrication of cryo-sample blocks for freshly frozen tissue microarrays or cell culture microarrays
• Construction in a variety of formats using a “LEGO” approach where cell/tissue samples are loaded into a small block then combined with others to form a larger array

Advantages:

• Compared to paraffin embedded samples, the new technique decreases degradation of specimens and requires less tissue
• Compared to other freshly frozen methods using OCT, the new compound provides a way to shape the housing blocks of microarrays at room temperature, simplifying array construction
• New compound also enables arraying of red blood cell samples
• Quality of frozen samples is improved by slower quick freezing and avoiding cracks in blocks during manipulation, resulting in more reliable assay results

 

ADDITIONAL INFORMATION

File Number:

1995 

Other information:

Opportunity: Columbia University is seeking partners for licensing or sponsored research agreement.
Further Information:
Jerry Kokoshka
Senior Technology Licensing Officer
jk2108@columbia.edu
Tel: (212) 305-8884

CASE MANAGER

Jerry Kokoshka